you could get rid of all the audio files (as long as they aren't shared by other projects) by doing a "save as" and selecting the option to move source files to a selected folder. You can then delete this folder.
As for your project files, backups, peaks etc., i fear this is a manual job, unless you pre-designated particular folders beforehand, which it sounds like you didn't, unfortunately.
Hopefully someone knows a better way.
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